Hey homedg,
The swaybar itself (not the links) is secured tight enough in the rubber bushings to stop the swaybar moving freely on it's own, that is when there's not the weight of a 2 ton Jeep acting on it
So once you've disconnected the swaybar links you just pull the swaybar up out of the way - I normally leave mine parallel to the chassis rails and it's therefore no where near anything....even if it was loose enough to move up and down it shouldn't interfere with anything anyway.
The above is all fine unless you're actually talking about the links themselves?