I honestly don't think there will be an issue. I've had to do it myself in a JK Wrangler in a lot deeper water than that with the water over the bonnet without a problem.
However if you are worried just undo the fill plug on your diffs and stick your finger in. You should be able to get enough on your finger to tell if you have had any water ingress.
If the oil is clear then don't worry, if it is milky, than get your diffs drained and re-filled as soon as possible.
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Cheers,
Jamie
MY15 WK2 GC Limited 3.0L. Ironman lift, bullbar & winch. Uneek rack & sliders
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